PAST WORK
Prior mt DNA Data
By August 2002, the
NCBI database contained nearly 90,000 entries for animal
mitochondrial genes. The following summary indicates
that cyt b and COI have been the most intensively studied
of the 13 protein-coding genes in the mitochondrial
genome. Although twice as many sequences are available
for cyt b as for COI, nearly 90% of them derive from
chordates. By contrast, the COI sequences provide broad
taxonomic coverage, reflecting the availability of primers
for this gene which enable its recovery from most animal
groups. This ability to recover DNA from animals-at-large
indicates that COI satisfies one of the key design criteria
in the selection of a gene that could serve as the basis
for a microgenomic identification system.
Mitochondrial
Gene Sequences in NCBI (July 31st, 2002).
| PROTEIN
|
TOTAL |
CHORDATA |
ARTHROPODA |
OTHERS
|
| Cyt
B |
26193 |
22610 |
1604 |
1979 |
| COI |
12174 |
1598 |
7021 |
3555 |
| ATP6 |
4601 |
3881 |
70 |
644 |
| COII |
4060 |
648 |
3177 |
235 |
| ND2 |
2776 |
2452 |
224 |
100 |
| ND5 |
2370 |
565 |
1725 |
80 |
| ND1 |
2046 |
1137 |
638 |
271 |
| ND4 |
1957 |
1426 |
162 |
369 |
| ATP8 |
997 |
430 |
54 |
513 |
| ND3 |
987 |
820 |
69 |
98 |
| ND6 |
906 |
767 |
60 |
79 |
| ND4L |
852 |
677 |
75 |
100 |
| COIII |
795 |
534 |
134 |
127 |
| RIBOSOMAL |
TOTAL |
CHORDATA |
ARTHROPODA |
OTHERS
|
| 16S |
15453 |
6658 |
5668 |
3127 |
| 12S |
10717 |
7850 |
2242 |
625 |
|